| Conference speaker schedule detail |
| Session 1: Approaches to data mining
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8:30 - 9:30 am Thursday, October 7
Lijun Zhang, E. Olusegun George, Thomas Sutter
University of Memphis
A Hierarchical Bayesian Procedure for Clustering Genes
Mutlu Mete, Nurcan Yuruk, Xiaowei Xu
University of Arkansas at Little Rock
Mining Concept Associations for Knowledge Discovery in Medline
Andrey Ptitsyn
Pennington Biomedical Research Center
The CLU for effective EST clustering
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| Session 2: Microarray data mining
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9:45 - 10:45 am Thursday, October 7
Leming Shi, Weida Tong, Hong Fang, Huixiao Hong, Qian Xie, Roger G. Perkins, James J. Chen, Ralph L. Kodell, Tao Han, James C. Fuscoe, Tucker A. Patterson, and Daniel A. Casciano
National Center for Toxicological Research, FDA
Quality Control (QC) Metrics and Thresholds for Assessing the Overall Quality of a Microarray Study
Dung-Tsa Chen, James Chen, Chen-An Tsai, Seng-jaw Soong
University of Alabama at Birmingham, FDA, University of Alabama at Birmingham, University of Alabama at Birmingham
A Non-Parametric Approach to Identify Altered Genes in Oligonucleotide Arrays
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| Session 3: Application of "omics' approaches
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11:00 - Noon Thursday, October 7
Mutlu Mete, Xiaowei Xu
Department of Information Science, University of Arkansas at Little Rock
Looking for Needle in Haystack: Data Mining Techniques for Accurate Classification of Cancers Using Microarray Data
H Fang, W Tong, R Perkins, L Shi, H Hong, Q Xie, SH Yim, JM Ward, and YP Dragan
NCTR
Liver Cancer Analysis Using Cross Species Mapping Based on Rat Gene Expression Profiling
William Slikker, Jr., Zengjun Xu and Cheng Wang
NCTR
Systems Biology /Systems Toxicology: Application to Developmental Neurotoxicology
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| Session 4: Pattern recognition
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1:45 - 2:45 pm Thursday, October 7
Qian Xie, Luke Ratnasinghe, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins, Weida Tong
NCTR
Single nucleotide polymorphisms study of esophageal cancer using a novel pattern recognition method
Stephen Winters-Hilt
Computer Science Dept., Univ. of New Orleans & The Research Institute for Children, New Orleans
Immunoinformatics, Cheminformatics, Bioinformatics: new opportunities using Nanopore Detection with Machine Learning Signal Analysis
Malathi Srivatsan
Department of Biological Sciences, Arkansas State University, Jonesboro
An analysis of acetylcholinesterase sequence for possible clues to the mechanism of its neurotrophic action
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| Session 5: Application of proteomics
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3:00 - 4:00 pm Thursday, October 7
Yong Tang, Yingfeng Chen, Cheryl F. Lichti, Kevin Raney, Steve Jennings
University of Arkansas at Little Rock, Universtiy of Arkansas Medical School
A Cross-linked Peptides Mapping Algorithm
Srinivas Chappidi, Mark Yeager, Mark Miller
University of Mississippi, Merck & Co.
PEMS:Proteomics Experiment Management System
Weida Tong, Qian Xie, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins
NCTR
Decision Forest for predicting prostate cancer based on SELDI-TOF MS data
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| Session 6: Biomarkers
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8:00 - 9:00 am Friday, October 8
Huixiao Hong (1), Yvonne Dragan (1), Joshua Epstein (1), Bangzheng Chen (1), Candee Teitel (2), Qian Xie (1), Hong Fang (1), Leming Shi (1), Roger Perkins (1), Weida Tong (1)
1. NCTR 2. ACRC
Biomarker identification through analysis of SELDI-TOF mass spectra
Philip H Williams, Xiaowei Xu
University of Arkansas at Little Rock
Classification of Ovarian Cancer from Non-cancer in SELDI Mass Spec data for use in Disease Biomarker Identification
Jennifer Roller, Anastas Pashov, Thomas Kieber-Emmons, Stewart Macleod, Jason Plaxco
Hendrix College and Breast Cancer Research Lab, ACRC at UAMS
An Investigation of Carbohydrate Mimicking Peptides
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| Session 7: Novel analysis approaches
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9:15 - 10:15 am Friday, October 8
David Threm, Mariofanna Milanova
University of Arkansas at Little Rock, Computer Science Department
Molecular Viewer - Visualization of the Hydrolysis of Mustard Blister Agent
Christina Welch (1), Robert Woodley (2), Levent Acar (3), Matt Insall (1)
(1) Mathematics & Statistics Department, University of Missouri-Rolla; (2) 21st Century Systems, Inc.; (3) Department of Electrical and Computer Engineering, University of Missouri - Rolla
A Relative Representation of Two-dimensional Visual Information Using Natural Attributes
Nikhil Garge, Grier P Page, Alan P Sprague, David B Allison
University of Alabama at Birmingham
Cluster Stability in Microarrays
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2004 conference schedule |
| Thu |
7-8am |
Poster setup |
| |
7-8am |
Registration/Morning Refreshments |
| |
8-8:30am |
Welcome |
| |
8:30-9:30am |
Session 1:
Approaches to data mining |
| |
9:30-9:45am |
Break |
| |
9:45-10:45am |
Session 2:
Microarray data mining |
| |
10:45-11:00am |
Break |
| |
11:00-noon |
Session 3:
Application of "omics' approaches |
| |
12:00-1:45pm |
MCBIOS Business Lunch (Included in registration) |
| |
1:45-2:45pm |
Session 4:
Pattern recognition |
| |
2:45-3pm |
Break |
| |
3-4pm |
Session 5:
Application of proteomics |
| |
4-6pm |
Poster Session |
| |
6:30-9pm |
Dinner at Juanita's (Included in registration) |
| Fri |
7-8:00am |
Morning Refreshments |
| |
8-9:00am |
Session 6:
Biomarkers |
| |
9:00-9:15am |
Break |
| |
9:15-10:15am |
Session 7:
Novel analysis approaches |
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10:15-10:30am |
Break |
| |
10:30-11:45am |
Dr. Michael Gribskov, President
International Society for Computational Biology (ISCB) |
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11:45am-Noon |
Closing Remarks/Award Presentations |
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Noon-1:30pm |
Lunch break ON OWN |
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11:00am-1:30pm |
Arkansas BRIN Research Symposium Registration / Poster Setup |
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1:30-1:45pm |
Arkansas BRIN Research Symposium Welcome |
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1:45-3:00pm |
Dr. Alan Leshner, Chief Executive Officer
American Association for the Advancement of Science and
Executive Publisher of Science |
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3:00-3:30am |
Break |
| |
3:30-5:30pm |
Poster Session |
| |
6:00-9:00pm |
Dinner at Peabody (Included in registration) |
| Sat |
9:00-11:30am |
Statistical Analysis w/ S-Plus and Array Analyzer
(provided by Insightful)
Register now! |
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